Robust Segmentation Models Using an Uncertainty Slice Sampling-Based Annotation Workflow

نویسندگان

چکیده

Semantic segmentation neural networks require pixel-level annotations in large quantities to achieve a good performance. In the medical domain, such are expensive because they time-consuming and expert knowledge. Active learning optimizes annotation effort by devising strategies select cases for labeling that most informative model. this work, we propose an uncertainty slice sampling (USS) strategy semantic of 3D volumes selects 2D image slices compare it with various other strategies. We demonstrate efficiency USS on CT liver task using multisite data. After five iterations, training data resulting from consisted 2410 (4% all pool) compared 8121(13%), 8641(14%), 3730(6%) volume (UVS), random (RVS), (RSS) sampling, respectively. Despite being trained smallest amount data, model based evaluated 234 test significantly outperformed models according UVS, RVS, RSS achieved mean Dice index 0.964, relative error 4.2%, surface distance 1.35mm, Hausdorff 23.4mm. This was only slightly inferior 0.967, 3.8%, 1.18mm, 22.9mm available Our robustness analysis 5th percentile 95th remaining metrics demonstrated not resulted robust strategies, but also (0.946 vs. 0.945) (1.92mm 2.03mm).

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ژورنال

عنوان ژورنال: IEEE Access

سال: 2022

ISSN: ['2169-3536']

DOI: https://doi.org/10.1109/access.2022.3141021